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WormBase Tree Display for Gene: WBGene00108628

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Name Class

WBGene00108628SMapS_parentSequencePPA_ChrI
IdentityVersion3
NameCGC_namePpa-bgal-1From_analysisInferred_from_orthology
Sequence_namePPA19074
Molecular_namePPA19074
PPA19074.1
PP54790
Other_nameGENEPREDICTION_SNAP300000075893
UMM-S71-29.7Person_evidenceWBPerson606
Ppa-bgal-2From_analysisInferred_from_orthology
Public_namePpa-bgal-1
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:05WBPerson4055EventImportedfrom NGASP
225 Sep 2014 10:52:55WBPerson2970Name_changeCGC_namePpa-bgal-2
320 Mar 2018 10:26:11WBPerson4025Name_changeCGC_namePpa-bgal-1
Other_namePpa-bgal-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classbgal
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
RNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00181897
00181898
00181899
OrthologWBGene00011832Caenorhabditis elegansFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00019225Caenorhabditis elegansFrom_analysisInparanoid_8
WormBase-Compara
WBGene00032143Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00041547Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00051438Caenorhabditis remaneiFrom_analysisInparanoid_8
WormBase-Compara
WBGene00072805Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00141646Caenorhabditis brenneriFrom_analysisInparanoid_8
WormBase-Compara
WBGene00141046Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00184961Caenorhabditis brenneriFrom_analysisInparanoid_8
WormBase-Compara
WBGene00121510Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00226096Brugia malayiFrom_analysisWormBase-Compara
WBGene00125748Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00242932Onchocerca volvulusFrom_analysisWormBase-Compara
CBOVI.g11854Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g1686Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g10773Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g4539Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g10833Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g12495Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g11611Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g11612Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g4720Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g18263Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g2742Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g2743Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g20735Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g25447Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g10355Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g9235Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g16278Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g496Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g1691Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g20233Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g352Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g18773Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g3533Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00325.g9229Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-bgal-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_X.g24607Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_X.g24608Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold320.g796Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold519.g2795Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00033.g1827Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00033.g1828Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00249.g7955Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_00295Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_16509Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_016664Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_024642Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g07689Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g16399Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g20842Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_50315800Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_X0194020Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrV_pilon.g15716Caenorhabditis elegansFrom_analysisWormBase-Compara
chrX_pilon.g19299Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00262515Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00263528Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00288338Trichuris murisFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable beta-galactosidase activity. Predicted to be involved in carbohydrate metabolic process. Is an ortholog of C. elegans bgal-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA19074
Corresponding_transcriptPPA19074.1
Other_sequenceJO469663.1
Oden_isotig04778
HG07265
EX552684.1
BU586307.1
Oden_isotig06574
AI239253.1
Oden_isotig04776
JI169420.1
JI168510.1
HGC07849_1
Oden_isotig06575
ALC00593_1
HG12118
Oden_isotig06578
Oden_isotig06573
Acan_isotig14366
Oden_isotig06576
Oden_isotig04774
TSC08920_1
Oden_isotig04775
Dviv_isotig10483
Oden_isotig04781
Oden_isotig06579
Dviv_isotig10482
ACC30387_1
Acan_isotig14356
Oden_isotig04782
ES569570.1
OVC02512_1
Oden_isotig06577
Oden_isotig04779
Oden_isotig22615
Oden_isotig04780
Oden_isotig04777
Experimental_infoMicroarray_resultsGPL14372_Probes_27685
GPL14372_Probes_27686
GPL14372_Probes_27687
GPL14372_Probes_27688
GPL14372_Probes_27689
Expression_clusterWBPaper00041606:PP_X.nematophila_regulated
MethodGene