WormBase Tree Display for Gene: WBGene00108660
expand all nodes | collapse all nodes | view schema
| WBGene00108660 | SMap | S_parent | Sequence | PPA_ChrI | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | |||||||
| Name | Sequence_name | PPA19106 | |||||||
| Molecular_name | PPA19106 | ||||||||
| PPA19106.1 | |||||||||
| PP54377 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000075925 | ||||||||
| GENEPREDICTION_SNAP300000075928 | |||||||||
| GENEPREDICTION_SNAP300000075929 | |||||||||
| GENEPREDICTION_SNAP300000075931 | |||||||||
| UMM-S71-31.32 | Person_evidence | WBPerson606 | |||||||
| Public_name | PPA19106 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:05 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 24 Nov 2017 09:46:50 | WBPerson4055 | Event | Acquires_merge | WBGene00108663 | ||||
| 3 | 24 Nov 2017 09:46:50 | WBPerson4055 | Event | Acquires_merge | WBGene00108664 | ||||
| 4 | 24 Nov 2017 09:46:50 | WBPerson4055 | Event | Acquires_merge | WBGene00108666 | ||||
| Acquires_merge | WBGene00108663 | ||||||||
| WBGene00108664 | |||||||||
| WBGene00108666 | |||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| RNASeq_FPKM | WBls:0000032 | 3.37624 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 1.78993 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 1.99354 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| GO_annotation | 00181913 | ||||||||
| 00181914 | |||||||||
| 00181915 | |||||||||
| 00181916 | |||||||||
| 00181917 | |||||||||
| 00181918 | |||||||||
| Ortholog (172) | |||||||||
| Paralog | WBGene00102107 | Pristionchus pacificus | From_analysis | Inparanoid_8 | |||||
| WBGene00103691 | Pristionchus pacificus | From_analysis | Inparanoid_8 | ||||||
| WBGene00118807 | Pristionchus pacificus | From_analysis | Inparanoid_8 | ||||||
| WBGene00118467 | Pristionchus pacificus | From_analysis | Inparanoid_8 | ||||||
| WBGene00278830 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; galactoside 2-alpha-L-fucosyltransferase activity; and sequence-specific DNA binding activity. Predicted to be involved in carbohydrate metabolic process and regulation of DNA-templated transcription. Predicted to be located in membrane. Is an ortholog of C. elegans fut-2; F41D3.6; and F08A8.5. In C. elegans, fut-2 is involved in macromolecule glycosylation. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA19106 | |||||||
| Corresponding_transcript | PPA19106.1 | ||||||||
| Other_sequence | PPC07509_1 | ||||||||
| Experimental_info | Microarray_results (12) | ||||||||
| Expression_cluster | WBPaper00041207:PP_dauer_up | ||||||||
| Method | Gene |
