WormBase Tree Display for Gene: WBGene00108883
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| WBGene00108883 | SMap | S_parent | Sequence | PPA_ChrI | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 6 | |||||||
| Name | Sequence_name | PPA19329 | |||||||
| Molecular_name | PPA19329 | ||||||||
| PPA19329.1 | |||||||||
| PP54001 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000075943 | ||||||||
| GENEPREDICTION_SNAP300000085779 | |||||||||
| GENEPREDICTION_SNAP300000085780 | |||||||||
| UMM-S589-0.12 | Person_evidence | WBPerson606 | |||||||
| Ppa-ttn-1 | From_analysis | Inferred_from_orthology | |||||||
| Public_name | PPA19329 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:06 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 24 Nov 2017 09:46:52 | WBPerson4055 | Event | Acquires_merge | WBGene00118540 | ||||
| 3 | 24 Nov 2017 09:46:52 | WBPerson4055 | Event | Acquires_merge | WBGene00118541 | ||||
| 4 | 01 Oct 2019 10:47:49 | WBPerson1983 | Name_change | CGC_name | Ppa-ttn-1 | ||||
| 5 | 27 Nov 2019 12:48:14 | WBPerson1983 | Name_change | CGC_name | Ppa-ttn-1.1 | ||||
| Other_name | Ppa-ttn-1 | ||||||||
| 6 | 04 Feb 2020 15:43:57 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| Acquires_merge | WBGene00118540 | ||||||||
| WBGene00118541 | |||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| RNASeq_FPKM | WBls:0000032 | 13.446 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| 4.482 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
| Ortholog (14) | |||||||||
| Paralog (11) | |||||||||
| Structured_description | Automated_description | Is predicted to encode a protein with the following domains: Fibronectin type III superfamily; Immunoglobulin I-set domain; Immunoglobulin I-set; Fibronectin type III; Immunoglobulin-like fold; Immunoglobulin subtype 2; Immunoglobulin-like domain superfamily; Fibronectin type III domain; and Immunoglobulin subtype. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA19329 | |||||||
| Corresponding_transcript | PPA19329.1 | ||||||||
| Other_sequence (63) | |||||||||
| Experimental_info | Microarray_results (21) | ||||||||
| Expression_cluster | WBPaper00041207:PP_dauer_down | ||||||||
| Remark | [200204 pad] The CGC name Ppa-ttn-1.1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| Method | Gene |
