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WormBase Tree Display for Gene: WBGene00109529

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Name Class

WBGene00109529SMapS_parentSequencePPA_ChrIII
IdentityVersion2
NameCGC_namePpa-amdh-1From_analysisInferred_from_orthology
Sequence_namePPA19975
Molecular_namePPA19975
PPA19975.1
PP75156
Other_nameGENEPREDICTION_SNAP300000076791
UMM-S66-4.53Person_evidenceWBPerson606
Public_namePpa-amdh-1
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:06WBPerson4055EventImportedfrom NGASP
228 May 2021 19:05:19WBPerson1983Name_changeCGC_namePpa-amdh-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classamdh
RNASeq_FPKMWBls:00000325.98974From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010118.5036From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
49.521From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
5.98974From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
GO_annotation00182330
00182331
00182332
00182333
00182334
Ortholog (54)
Structured_descriptionAutomated_descriptionPredicted to enable hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides. Predicted to be involved in histidine catabolic process to glutamate and formamide. Predicted to be located in cytoplasm. Is an ortholog of C. elegans amdh-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA19975
Corresponding_CDS_historyPPA19975:pp273
Corresponding_transcriptPPA19975.1
Other_sequence (42)
Experimental_infoMicroarray_resultsGPL14372_Probes_67087
GPL14372_Probes_67088
GPL14372_Probes_67089
GPL14372_Probes_67090
GPL14372_Probes_67091
Expression_clusterWBPaper00041207:PP_dauer_down
MethodGene