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WormBase Tree Display for Gene: WBGene00110553

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Name Class

WBGene00110553SMapS_parentSequencePPA_ChrII
IdentityVersion3
NameSequence_namePPA20999
Molecular_namePPA20999
PPA20999.1
PP54115
Other_nameGENEPREDICTION_SNAP300000077773
UMM-S10-59.21Person_evidenceWBPerson606
Public_namePPA20999
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:06WBPerson4055EventImportedfrom NGASP
212 Apr 2011 11:53:07WBPerson2970Name_changeCGC_namePpa-abu-14
320 Mar 2018 10:26:13WBPerson4025Name_changeCGC_nameRemoved
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
RNASeq.pristionchus.total_over_all_stages.control_mean
Ortholog (32)
ParalogWBGene00092796Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00113839Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00273801Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00279396Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs an ortholog of C. elegans pqn-2 and members of the C. elegans abu gene class including abu-1. In C. elegans, abu-1 is involved in endoplasmic reticulum unfolded protein response.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA20999
Corresponding_transcriptPPA20999.1
Experimental_infoMicroarray_resultsGPL14372_Probes_16616
GPL14372_Probes_16617
GPL14372_Probes_16618
Expression_clusterWBPaper00064862:Ppa-sul-2(tu1069)_J4.12_Down
Remark[180319 gw3] The CGC name Ppa-abu-14 was deleted as there was no evidence to support it.Curator_confirmedWBPerson4025
MethodGene