WormBase Tree Display for Gene: WBGene00110783
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| WBGene00110783 | SMap | S_parent | Sequence | PPA_ChrII | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 6 | |||||||
| Name | CGC_name | Ppa-sfxn-5 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA21229 | ||||||||
| Molecular_name | PPA21229 | ||||||||
| PPA21229.1 | |||||||||
| PP59709 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000077969 | ||||||||
| UMM-S41-43.15 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-sfxn-5 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:06 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 18 Nov 2010 11:54:46 | WBPerson2970 | Name_change | CGC_name | Ppa-sfxn-5 | ||||
| 3 | 08 Feb 2019 15:42:28 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 4 | 08 May 2019 10:09:23 | WBPerson1983 | Name_change | CGC_name | Ppa-sfxn-5 | ||||
| 5 | 28 May 2021 19:05:20 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 6 | 28 Jul 2021 11:12:28 | WBPerson1983 | Name_change | CGC_name | Ppa-sfxn-5 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sfxn | ||||||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| 20.9781 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| 6.9927 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
| GO_annotation | 00182890 | ||||||||
| 00182891 | |||||||||
| 00182892 | |||||||||
| 00182893 | |||||||||
| Ortholog (28) | |||||||||
| Paralog | WBGene00095197 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
| WBGene00102657 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00114837 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable monoatomic ion transmembrane transporter activity. Predicted to be involved in monoatomic ion transport and transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans sfxn-5. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA21229 | |||||||
| Corresponding_transcript | PPA21229.1 | ||||||||
| Other_sequence (13) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_77923 | |||||||
| GPL14372_Probes_77924 | |||||||||
| GPL14372_Probes_77925 | |||||||||
| GPL14372_Probes_77926 | |||||||||
| GPL14372_Probes_77927 | |||||||||
| Remark | [190208 pad] The CGC name Ppa-sfxn-5 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [210528 pad] The CGC name Ppa-sfxn-5 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
