WormBase Tree Display for Gene: WBGene00110852
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| WBGene00110852 | SMap | S_parent | Sequence | PPA_ChrII | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | Ppa-efl-3 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA21298 | ||||||||
| Molecular_name | PPA21298 | ||||||||
| PPA21298.1 | |||||||||
| PP74641 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000078043 | ||||||||
| UMM-S10-52.25 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-efl-3 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:06 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 18 Jan 2011 10:21:04 | WBPerson2970 | Name_change | CGC_name | Ppa-efl-3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | efl | ||||||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||||
| GO_annotation | 00182920 | ||||||||
| 00182921 | |||||||||
| 00182922 | |||||||||
| 00182923 | |||||||||
| Ortholog (27) | |||||||||
| Paralog | WBGene00089771 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
| WBGene00097603 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be part of transcription regulator complex. Is an ortholog of C. elegans efl-3. In C. elegans, efl-3 is involved in negative regulation of gene expression. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA21298 | |||||||
| Corresponding_CDS_history | PPA21298:pp270 | ||||||||
| Corresponding_transcript | PPA21298.1 | ||||||||
| Other_sequence | Dviv_isotig35076 | ||||||||
| JI170192.1 | |||||||||
| JI165989.1 | |||||||||
| ACC19820_1 | |||||||||
| EX557338.1 | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_81174 | |||||||
| Method | Gene |
