WormBase Tree Display for Gene: WBGene00111263
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| WBGene00111263 | SMap | S_parent | Sequence | PPA_ChrI | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | PPA21709 | |||||||
| Molecular_name | PPA21709 | ||||||||
| PPA21709.1 | |||||||||
| PP65058 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000078450 | ||||||||
| UMS-S207-8.9 | Person_evidence | WBPerson606 | |||||||
| Public_name | PPA21709 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:06 | WBPerson4055 | Event | Imported | from NGASP | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| RNASeq_FPKM | WBls:0000032 | 4.37212 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 10.3272 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | ||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| 4.37212 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| 4.89977 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
| Ortholog (50) | |||||||||
| Structured_description | Automated_description | Is predicted to encode a protein with the following domains: WD40/YVTN repeat-like-containing domain superfamily; WD domain, G-beta repeat; WD40 repeat; and WD40-repeat-containing domain superfamily. Is an ortholog of C. elegans atg-16.1 and atg-16.2. In C. elegans, atg-16.1 is involved in aggrephagy. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA21709 | |||||||
| Corresponding_transcript | PPA21709.1 | ||||||||
| Other_sequence | CRC09535_1 | ||||||||
| CR11615 | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_77398 | |||||||
| GPL14372_Probes_77399 | |||||||||
| GPL14372_Probes_77401 | |||||||||
| GPL14372_Probes_77402 | |||||||||
| Method | Gene |
