WormBase Tree Display for Gene: WBGene00111265
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WBGene00111265 | SMap | S_parent | Sequence | PPA_ChrI | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | Ppa-xbx-1 | From_analysis | Inferred_from_orthology | |||||
Sequence_name | PPA21711 | ||||||||
Molecular_name | PPA21711 | ||||||||
PPA21711.1 | |||||||||
PP69257 | |||||||||
Other_name | GENEPREDICTION_SNAP300000078452 | ||||||||
UMS-S207-8.11 | Person_evidence | WBPerson606 | |||||||
Public_name | Ppa-xbx-1 | ||||||||
Species | Pristionchus pacificus | ||||||||
History | Version_change | 1 | 06 Aug 2008 09:05:06 | WBPerson4055 | Event | Imported | from NGASP | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | xbx | ||||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||||
GO_annotation | 00183106 | ||||||||
00183107 | |||||||||
00183108 | |||||||||
Ortholog (27) | |||||||||
Structured_description | Automated_description | Predicted to be involved in intraciliary retrograde transport and intraciliary transport involved in cilium assembly. Predicted to be part of cytoplasmic dynein complex. Is an ortholog of C. elegans xbx-1. In C. elegans, xbx-1 is involved in intraciliary retrograde transport and non-motile cilium assembly. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | PPA21711 | |||||||
Corresponding_transcript | PPA21711.1 | ||||||||
Other_sequence | Oden_isotig28284 | ||||||||
Experimental_info | Microarray_results | GPL14372_Probes_24429 | |||||||
GPL14372_Probes_24430 | |||||||||
GPL14372_Probes_24431 | |||||||||
GPL14372_Probes_24432 | |||||||||
GPL14372_Probes_24433 | |||||||||
Reference | WBPaper00053472 | ||||||||
Method | Gene |