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WormBase Tree Display for Gene: WBGene00111598

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Name Class

WBGene00111598SMapS_parentSequencePPA_ChrX
IdentityVersion2
NameSequence_namePPA22044
Molecular_namePPA22044
PPA22044.1
PP66093
Other_nameGENEPREDICTION_SNAP300000078787
GENEPREDICTION_SNAP300000078788
UMM-S322-8.106Person_evidenceWBPerson606
Public_namePPA22044
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:06WBPerson4055EventImportedfrom NGASP
224 Nov 2017 09:46:51WBPerson4055EventAcquires_mergeWBGene00111599
Acquires_mergeWBGene00111599
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000003260.3434From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010136.3372From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
48.6681From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00183291
00183292
OrthologWBGene00000121Caenorhabditis elegansFrom_analysisOMA
WormBase-Compara
WBGene00215151Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00212761Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00207160Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00217428Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00142928Caenorhabditis brenneriFrom_analysisOMA
WormBase-Compara
WBGene00143218Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00144043Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00145339Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00145501Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00146474Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00156774Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00159396Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00160715Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00192109Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00271729Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00028541Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00039093Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00040468Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00040469Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00040470Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00271408Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00000120Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000122Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015329Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00126634Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00136109Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00218993Caenorhabditis japonicaFrom_analysisWormBase-Compara
CBOVI.g11358Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g11644Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g3527Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g14484Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g14568Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g2Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g3197Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g11030Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g19246Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g19251Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g6454Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g7771Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g7774Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g13507Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g19515Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g4037Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g4039Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g6464Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g7726Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g23862Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g6447Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g11033Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g12350Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g8640Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g9404Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g958Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g14442Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g17033Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g24487Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g6084Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g8790Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g975Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g1140Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g12739Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g12743Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g22653Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g7232Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00015.g1029Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-C02B10.4Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cni-aly-2Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cni-aly-3Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_IV.g13026Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_IV.g13027Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_IV.g13028Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold448.g1269Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold629.g10846Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold630.g17613Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold630.g20279Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold630.g20944Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00064.g3052Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00466.g11741Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00655.g14066Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00790.g15489Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00790.g15494Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_01256.g19627Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_01845.g23481Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_04857Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_11846Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_16551Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_16556Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_21088Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_013279Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_013330Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_013336Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_013526Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_014246Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g03166Oscheius tipulaeFrom_analysisWormBase-Compara
Sp34_40175500Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_40176300Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_40178000Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_40178500Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_40238000Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_40276700Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_40276800Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_40276900Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_40320600Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_40320700Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_40320900Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_40321100Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_40321200Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_40321400Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_40321600Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_40331000Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_40331100Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_40331200Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_40331300Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_40331400Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_40331500Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_40333800Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_40335400Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_40352600Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_40352900Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00063902Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00063905Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00064023Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066295Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00073663Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00073872Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00075068Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00080277Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00080514Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00082926Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrIV_pilon.g10355Caenorhabditis elegansFrom_analysisWormBase-Compara
chrIV_pilon.g11239Caenorhabditis elegansFrom_analysisWormBase-Compara
chrIV_pilon.g11245Caenorhabditis elegansFrom_analysisWormBase-Compara
chrIV_pilon.g12006Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00285690Trichuris murisFrom_analysisWormBase-Compara
WBGene00298093Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00090238Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00116154Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00275161Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable RNA binding activity. Is an ortholog of C. elegans aly-2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA22044
Corresponding_transcriptPPA22044.1
Other_sequencePP00867
PPC01414_1
Name_isotig02392
Oden_isotig09349
NB08791
PP02303
NBC02073_1
PPC17426_1
Oden_isotig09348
PPC04995_1
Experimental_infoMicroarray_resultsGPL14372_Probes_28884
GPL14372_Probes_28885
GPL14372_Probes_28886
GPL14372_Probes_28887
GPL14372_Probes_28888
GPL14372_Probes_28889
GPL14372_Probes_28891
GPL14372_Probes_28892
GPL14372_Probes_28893
GPL14372_Probes_28894
GPL14372_Probes_28895
Expression_clusterWBPaper00041207:PP_dauer_down
MethodGene