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WormBase Tree Display for Gene: WBGene00111955

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Name Class

WBGene00111955SMapS_parentSequencePPA_ChrII
IdentityVersion1
NameCGC_namePpa-hch-1From_analysisInferred_from_orthology
Sequence_namePPA22401
Molecular_namePPA22401
PPA22401.1
PP58749
Other_nameGENEPREDICTION_SNAP300000079139
UMM-S41-34.15Person_evidenceWBPerson606
Public_namePpa-hch-1
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:06WBPerson4055EventImportedfrom NGASP
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classhch
RNASeq_FPKMWBls:00000322.68985From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001012.68985From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
3.54379From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
7.94153From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00183407
00183408
00183409
00183410
Ortholog (30)
Paralog (61)
Structured_descriptionAutomated_descriptionPredicted to enable metalloendopeptidase activity and zinc ion binding activity. Predicted to be involved in proteolysis. Is an ortholog of C. elegans hch-1. In C. elegans, hch-1 is involved in hatching and neuron migration.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA22401
Corresponding_transcriptPPA22401.1
Other_sequencePPC01720_1
EV853644.1
DVC03058_1
CR00820
Dviv_isotig17689
JI165399.1
HBC16075_1
PP00055
FF678124.1
CRC05392_1
Experimental_infoMicroarray_resultsGPL14372_Probes_85279
GPL14372_Probes_85280
GPL14372_Probes_85281
MethodGene