WormBase Tree Display for Gene: WBGene00111982
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WBGene00111982 | SMap | S_parent | Sequence | PPA_ChrI | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||||
Name | CGC_name | Ppa-pfut-1 | From_analysis | Inferred_from_orthology | |||||
Sequence_name | PPA22428 | ||||||||
Molecular_name | PPA22428 | ||||||||
PPA22428.1 | |||||||||
PP74651 | |||||||||
Other_name | GENEPREDICTION_SNAP300000079003 | ||||||||
GENEPREDICTION_SNAP300000080620 | |||||||||
UMM-S57-5.60 | Person_evidence | WBPerson606 | |||||||
Public_name | Ppa-pfut-1 | ||||||||
Species | Pristionchus pacificus | ||||||||
History | Version_change | 1 | 06 Aug 2008 09:05:06 | WBPerson4055 | Event | Imported | from NGASP | ||
2 | 24 Nov 2017 09:46:51 | WBPerson4055 | Event | Acquires_merge | WBGene00113288 | ||||
3 | 28 May 2021 19:05:19 | WBPerson1983 | Name_change | CGC_name | Ppa-pfut-1 | ||||
Acquires_merge | WBGene00113288 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | pfut | ||||||||
RNASeq_FPKM | WBls:0000032 | 6.69776 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
WBls:0000101 | 3.55106 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
3.95543 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
GO_annotation | 00183425 | ||||||||
00183426 | |||||||||
00183427 | |||||||||
Ortholog (29) | |||||||||
Structured_description | Automated_description | Predicted to enable peptide-O-fucosyltransferase activity. Predicted to be involved in Notch signaling pathway and protein O-linked fucosylation. Is an ortholog of C. elegans pfut-1. In C. elegans, pfut-1 is involved in protein O-linked fucosylation. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | PPA22428 | |||||||
Corresponding_CDS_history | PPA22428:pp270 | ||||||||
Corresponding_transcript | PPA22428.1 | ||||||||
Other_sequence (19) | |||||||||
Experimental_info | Microarray_results | GPL14372_Probes_68855 | |||||||
GPL14372_Probes_68856 | |||||||||
GPL14372_Probes_68857 | |||||||||
GPL14372_Probes_68858 | |||||||||
GPL14372_Probes_78790 | |||||||||
Method | Gene |