WormBase Tree Display for Gene: WBGene00112297
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| WBGene00112297 | SMap | S_parent | Sequence | PPA_ChrII | ||
|---|---|---|---|---|---|---|
| Identity | Version | 11 | ||||
| Name | CGC_name | Ppa-rol-8 | From_analysis | Inferred_from_orthology | ||
| Sequence_name | PPA22743 | |||||
| Molecular_name | PPA22743 | |||||
| PPA22743.1 | ||||||
| PP75738 | ||||||
| Other_name | GENEPREDICTION_SNAP300000079484 | |||||
| GENEPREDICTION_SNAP300000079485 | ||||||
| UMM-S10-93.17 | Person_evidence | WBPerson606 | ||||
| Ppa-klp-7 | From_analysis | Inferred_from_orthology | ||||
| Public_name | Ppa-rol-8 | |||||
| Species | Pristionchus pacificus | |||||
| History | Version_change (11) | |||||
| Acquires_merge | WBGene00112298 | |||||
| Split_into | WBGene00305165 | |||||
| Status | Live | |||||
| Gene_info | Biotype | SO:0001217 | ||||
| Gene_class | rol | |||||
| RNASeq_FPKM | WBls:0000032 | 25.296 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | ||
| RNASeq.pristionchus.WBls:0000032.control_median | ||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||||||
| WBls:0000101 | 18.3911 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||
| 25.296 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||
| 29.8772 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | ||||
| RNASeq.pristionchus.WBls:0000101.control_median | ||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | ||||||
| GO_annotation | 00183629 | |||||
| Ortholog (35) | ||||||
| Paralog (148) | ||||||
| Structured_description | Automated_description | Predicted to be a structural constituent of cuticle. Is an ortholog of C. elegans rol-8. | Paper_evidence | WBPaper00065943 | ||
| Curator_confirmed | WBPerson324 | |||||
| WBPerson37462 | ||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||
| Molecular_info | Corresponding_CDS | PPA22743 | ||||
| Corresponding_CDS_history | PPA22743:pp274 | |||||
| Corresponding_transcript | PPA22743.1 | |||||
| Other_sequence (190) | ||||||
| Experimental_info | Microarray_results | GPL14372_Probes_64326 | ||||
| GPL14372_Probes_64327 | ||||||
| GPL14372_Probes_64328 | ||||||
| Remark | [190208 pad] The CGC name Ppa-klp-7 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||
| [191001 pad] The CGC name Ppa-klp-7 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||
| [210528 pad] The CGC name Ppa-rol-8 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||
| Method | Gene |
