WormBase Tree Display for Gene: WBGene00113262
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| WBGene00113262 | SMap | S_parent | Sequence | PPA_ChrI | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | Ppa-erv-46 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA23708 | ||||||||
| Molecular_name | PPA23708 | ||||||||
| PPA23708.1 | |||||||||
| PP69013 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000080594 | ||||||||
| UMA-S57-6.35 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-erv-46 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:06 | WBPerson4055 | Event | Imported | from NGASP | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | erv | ||||||||
| RNASeq_FPKM | WBls:0000032 | 13.082 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 6.18025 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| 6.42075 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
| Ortholog (29) | |||||||||
| Paralog | WBGene00108228 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Is predicted to encode a protein with the following domains: Cytochrome b5-like heme/steroid binding domain superfamily; Endoplasmic reticulum vesicle transporter; Endoplasmic reticulum vesicle transporter, N-terminal; Endoplasmic reticulum vesicle transporter, C-terminal; Cytochrome b5-like heme/steroid binding domain; Cytochrome b5-like Heme/Steroid binding domain; and Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC). Is an ortholog of C. elegans ergi-3. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA23708 | |||||||
| Corresponding_transcript | PPA23708.1 | ||||||||
| Other_sequence (126) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_17914 | |||||||
| GPL14372_Probes_17915 | |||||||||
| GPL14372_Probes_17916 | |||||||||
| GPL14372_Probes_17918 | |||||||||
| Expression_cluster | WBPaper00041207:PP_dauer_up | ||||||||
| Method | Gene |
