WormBase Tree Display for Gene: WBGene00113322
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| WBGene00113322 | SMap | S_parent | Sequence | PPA_ChrI | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | Ppa-acox-1.1 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA23768 | ||||||||
| Molecular_name | PPA23768 | ||||||||
| PPA23768.1 | |||||||||
| PP65280 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000080654 | ||||||||
| Ppa-acox-1 | From_analysis | Inferred_from_orthology | |||||||
| UMM-S57-4.89 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-acox-1.1 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:06 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 19 Jul 2010 13:52:33 | WBPerson2970 | Name_change | CGC_name | Ppa-acox-1 | ||||
| 3 | 05 Jan 2017 12:27:38 | WBPerson2970 | Name_change | CGC_name | Ppa-acox-1.1 | ||||
| Other_name | Ppa-acox-1 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | acox | ||||||||
| RNASeq_FPKM | WBls:0000032 | 12.1456 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 12.1456 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| 21.8077 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
| 53.2774 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| GO_annotation | 00184119 | ||||||||
| 00184120 | |||||||||
| 00184121 | |||||||||
| 00184122 | |||||||||
| 00184123 | |||||||||
| 00184124 | |||||||||
| 00184125 | |||||||||
| Ortholog (15) | |||||||||
| Paralog (18) | |||||||||
| Structured_description | Automated_description | Predicted to enable FAD binding activity and acyl-CoA oxidase activity. Predicted to be involved in fatty acid beta-oxidation. Predicted to be located in peroxisome. Is an ortholog of C. elegans acox-1.1. In C. elegans, acox-1.1 is involved in ascaroside biosynthetic process; fatty acid beta-oxidation using acyl-CoA oxidase; and pheromone biosynthetic process. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA23768 | |||||||
| Corresponding_transcript | PPA23768.1 | ||||||||
| Other_sequence (24) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_73845 | |||||||
| GPL14372_Probes_78745 | |||||||||
| GPL14372_Probes_78746 | |||||||||
| Method | Gene |
