WormBase Tree Display for Gene: WBGene00113652
expand all nodes | collapse all nodes | view schema
WBGene00113652 | SMap | S_parent | Sequence | PPA_ChrI | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 9 | |||||||
Name | CGC_name | Ppa-fpn-1.1 | From_analysis | Inferred_from_orthology | |||||
Sequence_name | PPA24098 | ||||||||
Molecular_name | PPA24098 | ||||||||
PPA24098.1 | |||||||||
PP68973 | |||||||||
Other_name | GENEPREDICTION_SNAP300000080990 | ||||||||
UMM-S7-79.21 | Person_evidence | WBPerson606 | |||||||
Ppa-fpn-1.3 | |||||||||
Public_name | Ppa-fpn-1.1 | ||||||||
Species | Pristionchus pacificus | ||||||||
History | Version_change | 1 | 06 Aug 2008 09:05:06 | WBPerson4055 | Event | Imported | from NGASP | ||
2 | 18 Nov 2010 11:54:47 | WBPerson2970 | Name_change | CGC_name | Ppa-fpn-1.3 | ||||
3 | 20 Mar 2018 10:26:11 | WBPerson4025 | Name_change | CGC_name | Ppa-fpn-1.1 | ||||
Other_name | Ppa-fpn-1.3 | ||||||||
4 | 08 Feb 2019 15:42:29 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
5 | 08 May 2019 10:09:22 | WBPerson1983 | Name_change | CGC_name | Ppa-fpn-1.1 | ||||
6 | 01 Oct 2019 10:47:49 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
7 | 27 Nov 2019 12:48:14 | WBPerson1983 | Name_change | CGC_name | Ppa-fpn-1.1 | ||||
8 | 28 May 2021 19:05:21 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
9 | 28 Jul 2021 11:12:27 | WBPerson1983 | Name_change | CGC_name | Ppa-fpn-1.1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | fpn | ||||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||||
GO_annotation | 00184259 | ||||||||
00184260 | |||||||||
00184261 | |||||||||
Ortholog (26) | |||||||||
Paralog | WBGene00096360 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
WBGene00117006 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00280179 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to enable iron ion transmembrane transporter activity. Predicted to be involved in iron ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans fpn-1.1. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | PPA24098 | |||||||
Corresponding_transcript | PPA24098.1 | ||||||||
Other_sequence | MH10400 | ||||||||
XI03683 | |||||||||
PPC12847_1 | |||||||||
BMC07581_1 | |||||||||
PPC13752_1 | |||||||||
Experimental_info | Microarray_results | GPL14372_Probes_13311 | |||||||
GPL14372_Probes_13312 | |||||||||
GPL14372_Probes_13313 | |||||||||
GPL14372_Probes_13316 | |||||||||
GPL14372_Probes_13317 | |||||||||
GPL14372_Probes_13318 | |||||||||
Expression_cluster | WBPaper00041207:PP_dauer_down | ||||||||
WBPaper00041606:PP_X.nematophila_regulated | |||||||||
Remark | [190208 pad] The CGC name Ppa-fpn-1.1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
[191001 pad] The CGC name Ppa-fpn-1.1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
[210528 pad] The CGC name Ppa-fpn-1.1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
Method | Gene |