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WormBase Tree Display for Gene: WBGene00113679

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Name Class

WBGene00113679SMapS_parentSequencePPA_ChrI
IdentityVersion1
NameSequence_namePPA24125
Molecular_namePPA24125
PPA24125.1
PP69676
Other_nameGENEPREDICTION_SNAP300000081017
UMM-S7-80.26Person_evidenceWBPerson606
Public_namePPA24125
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:06WBPerson4055EventImportedfrom NGASP
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000003218.938From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010113.0224From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
18.938From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
20.1293From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00184271
00184272
00184273
Ortholog (33)
ParalogWBGene00094254Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00095490Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00098372Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00100808Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00113673Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable sphingomyelin phosphodiesterase activity. Predicted to be involved in sphingomyelin catabolic process. Is an ortholog of C. elegans asm-3. In C. elegans, asm-3 is involved in lipid droplet disassembly.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA24125
Corresponding_transcriptPPA24125.1
Other_sequenceHbac_isotig03692
Experimental_infoMicroarray_resultsGPL14372_Probes_60186
GPL14372_Probes_60187
GPL14372_Probes_60188
GPL14372_Probes_60192
GPL14372_Probes_60193
GPL14372_Probes_60194
GPL14372_Probes_60195
Expression_clusterWBPaper00041606:PP_X.nematophila_regulated
MethodGene