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WormBase Tree Display for Gene: WBGene00113750

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Name Class

WBGene00113750SMapS_parentSequencePPA_ChrIV
IdentityVersion9
NameSequence_namePPA24196
Molecular_namePPA24196
PPA24196.1
PP62677
Other_nameGENEPREDICTION_SNAP300000081085
GENEPREDICTION_SNAP300000081086
UMM-S2838-28.72Person_evidenceWBPerson606
Ppa-arl-5Inferred_automaticallyfrom gene merge
Ppa-arf-1.1.2From_analysisInferred_from_orthology
Ppa-arf-1.1From_analysisInferred_from_orthology
Public_namePPA24196
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:06WBPerson4055EventImportedfrom NGASP
217 Nov 2017 15:19:43WBPerson4055Name_changeCGC_namePpa-arl-5
324 Nov 2017 09:46:51WBPerson4055EventAcquires_mergeWBGene00113751
424 Nov 2017 09:46:52WBPerson4055EventAcquires_mergeWBGene00206159
520 Mar 2018 10:26:11WBPerson4025Name_changeCGC_namePpa-arf-1.1
Other_namePpa-arl-5
608 May 2019 10:09:27WBPerson1983Name_changeCGC_namePpa-arf-1.1.2
Other_namePpa-arf-1.1
701 Oct 2019 10:47:49WBPerson1983Name_changeCGC_namePpa-arf-1.1
Other_namePpa-arf-1.1.2
828 May 2021 19:05:19WBPerson1983Name_changeCGC_namePpa-warf-1
Other_namePpa-arf-1.1
928 Jul 2021 11:12:30WBPerson1983Name_changeCGC_nameRemoved
Acquires_mergeWBGene00113751
WBGene00206159
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
RNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00184304
00184305
OrthologWBGene00000190Caenorhabditis elegansFrom_analysisOMA
WBGene00156938Caenorhabditis brenneriFrom_analysisOMA
Structured_descriptionAutomated_descriptionPredicted to enable GTP binding activity and GTPase activity. Is an ortholog of C. elegans warf-1. In C. elegans, warf-1 is involved in IRE1-mediated unfolded protein response.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA24196
Corresponding_transcriptPPA24196.1
Other_sequencePPC04788_1
Dviv_isotig19176
HG05518
JI214631.1
Tcir_isotig29054
PP01101
Tcir_isotig03019
PPC21484_1
CJC17359_1
Experimental_infoMicroarray_resultsGPL14372_Probes_4661
GPL14372_Probes_44608
GPL14372_Probes_44610
GPL14372_Probes_44611
GPL14372_Probes_44614
Expression_clusterWBPaper00041207:PP_dauer_up
WBPaper00041466:PP_S.marcescens_regulated
WBPaper00041606:PP_S.marcescens_regulated
Remark[210728 pad] The CGC name Ppa-warf-1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene