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WormBase Tree Display for Gene: WBGene00115266

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Name Class

WBGene00115266SMapS_parentSequencePPA_ChrX
IdentityVersion7
NameCGC_namePpa-oat-1From_analysisInferred_from_orthology
Sequence_namePPA25712
Molecular_namePPA25712
PPA25712.1
PP58615
Other_nameGENEPREDICTION_SNAP300000082564
GENEPREDICTION_SNAP300000082566
UMM-S398-0.0Person_evidenceWBPerson606
Public_namePpa-oat-1
SpeciesPristionchus pacificus
HistoryVersion_change (7)
Acquires_mergeWBGene00115268
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classoat
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010.92242From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
0From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
2.76726From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00184950
00184951
00184952
Ortholog (89)
Paralog (26)
Structured_descriptionAutomated_descriptionPredicted to enable transmembrane transporter activity. Predicted to be involved in transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans oat-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA25712
Corresponding_transcriptPPA25712.1
Other_sequenceEY463758.1
EY471743.1
FC541551.1
FC547780.1
EY467122.1
FC547971.1
EY469177.1
FC547724.1
FC552475.1
FC552595.1
Experimental_infoMicroarray_resultsGPL14372_Probes_21882
GPL14372_Probes_21883
GPL14372_Probes_74501
Expression_clusterWBPaper00041207:PP_dauer_down
Remark[190208 pad] The CGC name Ppa-oat-1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Ppa-oat-1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene