WormBase Tree Display for Gene: WBGene00116008

WBGene00116008 SMap: S_parent: Sequence: PPA_ChrI
  Identity: Version: 2
    Name: CGC_name: Ppa-zmp-3 From_analysis: Inferred_from_orthology
      Sequence_name: PPA26454
      Molecular_name: PPA26454
        PPA26454.1
        PP75525
      Other_name: GENEPREDICTION_SNAP300000084878
        UMM-S7-46.75 Person_evidence: WBPerson606
      Public_name: Ppa-zmp-3
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:06 WBPerson4055 Event: Imported: from NGASP
        2 04 Jan 2016 15:57:05 WBPerson2970 Name_change: CGC_name: Ppa-zmp-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: zmp
    RNASeq_FPKM: WBls:0000032 5.78069 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 3.06481 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        3.41374 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    GO_annotation: 00185283
      00185284
      00185285
      00185286
      00185287
    Ortholog (33)
    Paralog: WBGene00093534 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00205290 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00275788 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00276521 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00276525 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00281787 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00281867 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable metalloendopeptidase activity and zinc ion binding activity. Predicted to be involved in proteolysis. Predicted to be located in extracellular matrix. Is an ortholog of C. elegans zmp-3. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA26454
    Corresponding_CDS_history: PPA26454:pp274
    Corresponding_transcript: PPA26454.1
    Other_sequence (26)
  Experimental_info: Microarray_results: GPL14372_Probes_36272
      GPL14372_Probes_36273
      GPL14372_Probes_36275
      GPL14372_Probes_36276
    Expression_cluster: WBPaper00064862:Ppa-sul-2(tu1069)_4M1_Up
  Method: Gene