WormBase Tree Display for Gene: WBGene00116105
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| WBGene00116105 | SMap | S_parent | Sequence | PPA_ChrI | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | |||||||
| Name | CGC_name | Ppa-pho-7 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA26551 | ||||||||
| Molecular_name | PPA26551 | ||||||||
| PPA26551.1 | |||||||||
| PP72153 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000084975 | ||||||||
| UMM-S7-42.58 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-pho-7 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:06 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 01 Oct 2019 10:47:49 | WBPerson1983 | Name_change | CGC_name | Ppa-pho-7 | ||||
| 3 | 27 Nov 2019 12:48:15 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 4 | 28 Jul 2021 11:12:29 | WBPerson1983 | Name_change | CGC_name | Ppa-pho-7 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pho | ||||||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 11.3811 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | ||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| 3.7937 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
| Ortholog (66) | |||||||||
| Paralog (35) | |||||||||
| Structured_description | Automated_description | Is predicted to encode a protein with the following domains: Histidine phosphatase superfamily; Histidine phosphatase superfamily, clade-2; and Histidine phosphatase superfamily (branch 2). Is an ortholog of C. elegans pho-7. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA26551 | |||||||
| Corresponding_transcript | PPA26551.1 | ||||||||
| Other_sequence | Dviv_isotig24751 | ||||||||
| CBC08769_1 | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_36186 | |||||||
| GPL14372_Probes_36187 | |||||||||
| Remark | [191127 pad] The CGC name Ppa-pho-7 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| Method | Gene |
