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WormBase Tree Display for Gene: WBGene00116530

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Name Class

WBGene00116530SMapS_parentSequencePPA_ChrIV
IdentityVersion6
NameCGC_namePpa-unc-43From_analysisInferred_from_orthology
Sequence_namePPA26976
Molecular_namePPA26976
PPA26976.1
PP52518
Other_nameGENEPREDICTION_SNAP300000083671
GENEPREDICTION_SNAP300000083672
UMM-S283-12.32Person_evidenceWBPerson606
Public_namePpa-unc-43
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:06WBPerson4055EventImportedfrom NGASP
224 Nov 2017 09:46:51WBPerson4055EventAcquires_mergeWBGene00116531
308 Feb 2019 15:42:28WBPerson1983Name_changeCGC_nameRemoved
408 May 2019 10:09:25WBPerson1983Name_changeCGC_namePpa-unc-43
528 May 2021 19:05:20WBPerson1983Name_changeCGC_nameRemoved
628 Jul 2021 11:12:28WBPerson1983Name_changeCGC_namePpa-unc-43
Acquires_mergeWBGene00116531
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00000323.51279From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001011.17093From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
0From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00185416
00185417
00185418
OrthologWBGene00191430Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00193267Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00156465Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00161168Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00027073Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00225268Brugia malayiFrom_analysisWormBase-Compara
WBGene00006779Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00132347Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00241264Onchocerca volvulusFrom_analysisWormBase-Compara
CBOVI.g8882Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g8684Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g19214Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g21691Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g7377Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g17076Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g8950Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g6862Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g9505Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g6682Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00167.g6074Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_IV.g14969Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g17706Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00056.g2781Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_14045Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_014913Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g13311Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g17002Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_40088100Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00059271Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrIV_pilon.g11571Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00265799Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00289108Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00104703Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00107447Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00111361Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00113704Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00304876Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00304968Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity and protein kinase activity. Is an ortholog of C. elegans unc-43. In C. elegans, unc-43 is involved in MAPK cascade; medium-term memory; and positive regulation of gene expression.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA26976
Corresponding_transcriptPPA26976.1
Other_sequenceOden_isotig11321
JI256860.1
JI482798.1
MHC02648_1
Oden_isotig11322
PP01829
JI467417.1
Tcol_isotig16916
ES744207.1
TM01263
EY473263.1
JI234209.1
JI478682.1
JI477604.1
Oden_isotig11320
MH06168
FK803267.1
JI167439.1
MH09351
Hbac_isotig01566
PPC00913_1
JI475442.1
FG586192.1
EX542795.1
MH09282
TM02102
BMC02277_1
MAC01325_1
Acan_isotig01664
JI468776.1
BXC03345_1
PPC17342_1
HG09755
JI480404.1
Acan_isotig01665
ACC06267_1
JI464735.1
MH06169
EX827920.1
Acan_isotig01663
Oden_isotig11323
EY471762.1
MHC11826_1
AE03764
Dviv_isotig01530
HBC19602_1
Tcir_isotig32096
ACC15573_1
MH09134
MA01998
AYC02516_1
TMC00026_1
Experimental_infoMicroarray_resultsGPL14372_Probes_71865
GPL14372_Probes_71866
GPL14372_Probes_71867
GPL14372_Probes_71868
Remark[190208 pad] The CGC name Ppa-unc-43 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Ppa-unc-43 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene