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WormBase Tree Display for Gene: WBGene00116845

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Name Class

WBGene00116845SMapS_parentSequencePPA_ChrI
IdentityVersion3
NameSequence_namePPA27291
Molecular_namePPA27291
PPA27291.1
PP67122
Other_nameGENEPREDICTION_SNAP300000084112
GENEPREDICTION_SNAP300000084113
UMM-S207-20.73Person_evidenceWBPerson606
Public_namePPA27291
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:07WBPerson4055EventImportedfrom NGASP
224 Nov 2017 09:46:51WBPerson4055EventAcquires_mergeWBGene00116846
320 Mar 2018 10:26:13WBPerson4025Name_changeCGC_nameRemoved
Acquires_mergeWBGene00116846
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000003215.8857From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010111.5487From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
15.8857From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
18.7605From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00185552
00185553
00185554
00185555
OrthologWBGene00016511Caenorhabditis elegansFrom_analysisOMA
WBGene00030562Caenorhabditis briggsaeFrom_analysisOMA
WBGene00057984Caenorhabditis remaneiFrom_analysisOMA
WBGene00209753Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00159709Caenorhabditis brenneriFrom_analysisOMA
OTIPU.nOt.2.0.1.g01438Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g2034Panagrellus redivivusFrom_analysisWormBase-Compara
WBGene00293454Trichuris murisFrom_analysisWormBase-Compara
WBGene00295295Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00099592Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00103807Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00105793Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00108051Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00275534Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00276800Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00279256Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00280306Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable acyl-CoA hydrolase activity and serine-type endopeptidase activity. Predicted to be involved in acyl-CoA metabolic process. Predicted to be located in membrane. Is an ortholog of C. elegans C37H5.13.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA27291
Corresponding_transcriptPPA27291.1
Other_sequence (19)
Experimental_infoMicroarray_resultsGPL14372_Probes_20428
GPL14372_Probes_20429
GPL14372_Probes_20430
GPL14372_Probes_20431
GPL14372_Probes_20432
Remark[180319 gw3] The CGC name Ppa-rom-5 was deleted as there was no evidence to support it.Curator_confirmedWBPerson4025
MethodGene