WormBase Tree Display for Gene: WBGene00116889
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| WBGene00116889 | SMap | S_parent | Sequence | PPA_ChrI | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | Sequence_name | PPA27335 | |||||||
| Molecular_name | PPA27335 | ||||||||
| PPA27335.1 | |||||||||
| PP70098 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000084156 | ||||||||
| UMM-S207-22.22 | Person_evidence | WBPerson606 | |||||||
| Public_name | PPA27335 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:07 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 20 Mar 2018 10:26:11 | WBPerson4025 | Name_change | CGC_name | Ppa-elc-1 | ||||
| 3 | 08 Feb 2019 15:42:29 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| RNASeq_FPKM | WBls:0000032 | 82.1803 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 10.2165 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| 30.7989 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
| GO_annotation | 00185595 | ||||||||
| Ortholog (45) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in ubiquitin-dependent protein catabolic process. Is an ortholog of C. elegans F54F7.10; elc-1; and elc-2. In C. elegans, elc-1 is involved in anterior/posterior axis specification, embryo; positive regulation of metaphase/anaphase transition of meiotic cell cycle; and sister chromosome movement towards spindle pole involved in meiotic sister chromatid segregation. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA27335 | |||||||
| Corresponding_transcript | PPA27335.1 | ||||||||
| Other_sequence (56) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_72364 | |||||||
| GPL14372_Probes_72365 | |||||||||
| GPL14372_Probes_72366 | |||||||||
| GPL14372_Probes_72367 | |||||||||
| GPL14372_Probes_72369 | |||||||||
| GPL14372_Probes_72370 | |||||||||
| GPL14372_Probes_72371 | |||||||||
| GPL14372_Probes_72372 | |||||||||
| GPL14372_Probes_72373 | |||||||||
| GPL14372_Probes_72374 | |||||||||
| Expression_cluster | WBPaper00041207:PP_dauer_up | ||||||||
| WBPaper00041606:PP_X.nematophila_regulated | |||||||||
| Remark | [190208 pad] The CGC name Ppa-elc-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| Method | Gene |
