WormBase Tree Display for Gene: WBGene00117048

WBGene00117048 SMap: S_parent: Sequence: PPA_ChrIV
  Identity: Version: 7
    Name: CGC_name: Ppa-xdh-1 From_analysis: Inferred_from_orthology
      Sequence_name: PPA27494
      Molecular_name: PPA27494
        PPA27494.1
        PP56582
      Other_name: GENEPREDICTION_SNAP300000084313
        GENEPREDICTION_SNAP300000084314
        UMM-S2840-102.53 Person_evidence: WBPerson606
      Public_name: Ppa-xdh-1
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:07 WBPerson4055 Event: Imported: from NGASP
        2 24 Nov 2017 09:46:51 WBPerson4055 Event: Acquires_merge: WBGene00117049
        3 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Ppa-xdh-1
        4 08 Feb 2019 15:42:29 WBPerson1983 Name_change: CGC_name: Removed
        5 08 May 2019 10:09:26 WBPerson1983 Name_change: CGC_name: Ppa-xdh-1
        6 28 May 2021 19:05:21 WBPerson1983 Name_change: CGC_name: Removed
        7 28 Jul 2021 11:12:29 WBPerson1983 Name_change: CGC_name: Ppa-xdh-1
      Acquires_merge: WBGene00117049
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: xdh
    RNASeq_FPKM: WBls:0000032 3.08149 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0.909748 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
        1.33041 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
    GO_annotation: 00185705
      00185706
      00185707
      00185708
      00185709
    Ortholog (54)
    Paralog: WBGene00093702 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00094624 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00099994 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00101851 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00107048 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00280769 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable ion binding activity; iron-sulfur cluster binding activity; and oxidoreductase activity. Is an ortholog of C. elegans xdh-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA27494
    Corresponding_transcript: PPA27494.1
    Other_sequence (21)
  Experimental_info: Microarray_results: GPL14372_Probes_30141
      GPL14372_Probes_30142
      GPL14372_Probes_30143
      GPL14372_Probes_30145
      GPL14372_Probes_86463
      GPL14372_Probes_86464
      GPL14372_Probes_86465
      GPL14372_Probes_86468
    Expression_cluster: WBPaper00041207:PP_dauer_down
  Remark: [190208 pad] The CGC name Ppa-xdh-1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Ppa-xdh-1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene