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WormBase Tree Display for Gene: WBGene00117379

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Name Class

WBGene00117379SMapS_parentSequencePPA_ChrV
IdentityVersion2
NameCGC_namePpa-ftn-2From_analysisInferred_from_orthology
Sequence_namePPA27825
Molecular_namePPA27825
PPA27825.1
PP66390
Other_nameGENEPREDICTION_SNAP300000084650
UMM-S13-19.18Person_evidenceWBPerson606
Ppa-ftn-1From_analysisInferred_from_orthology
Public_namePpa-ftn-2
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:07WBPerson4055EventImportedfrom NGASP
220 Mar 2018 10:26:12WBPerson4025Name_changeCGC_namePpa-ftn-2
Other_namePpa-ftn-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classftn
RNASeq_FPKMWBls:0000032259.719From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:0000101219.529From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
259.719From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
398.869From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00185820
00185821
00185822
Ortholog (54)
Structured_descriptionAutomated_descriptionPredicted to enable ferric iron binding activity. Predicted to be involved in intracellular iron ion homeostasis and iron ion transport. Is an ortholog of C. elegans ftn-2. In C. elegans, ftn-2 is involved in defense response to Gram-positive bacterium.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA27825
Corresponding_transcriptPPA27825.1
Other_sequence (151)
Experimental_infoMicroarray_resultsGPL14372_Probes_57053
GPL14372_Probes_57054
GPL14372_Probes_57055
GPL14372_Probes_57056
GPL14372_Probes_57057
Expression_clusterWBPaper00041207:PP_dauer_up
WBPaper00041606:PP_X.nematophila_regulated
MethodGene