WormBase Tree Display for Gene: WBGene00117732

WBGene00117732 SMap: S_parent: Sequence: PPA_ChrII
  Identity: Version: 7
    Name: CGC_name: Ppa-sgt-1 From_analysis: Inferred_from_orthology
      Sequence_name: PPA28178
      Molecular_name: PPA28178
        PPA28178.1
        PP55894
      Other_name: GENEPREDICTION_SNAP300000086595
        GENEPREDICTION_SNAP300000086596
        UMM-S10-75.48 Person_evidence: WBPerson606
      Public_name: Ppa-sgt-1
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:07 WBPerson4055 Event: Imported: from NGASP
        2 24 Nov 2017 09:46:51 WBPerson4055 Event: Acquires_merge: WBGene00117733
        3 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Ppa-sqv-2
                Other_name: Ppa-sgt-1
        4 08 Feb 2019 15:42:28 WBPerson1983 Name_change: CGC_name: Removed
        5 08 May 2019 10:09:22 WBPerson1983 Name_change: CGC_name: Ppa-sqv-2
        6 28 May 2021 19:05:20 WBPerson1983 Name_change: CGC_name: Removed
        7 28 Jul 2021 11:12:27 WBPerson1983 Name_change: CGC_name: Ppa-sgt-1
      Acquires_merge: WBGene00117733
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sgt
    RNASeq_FPKM: WBls:0000032 7.25524 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 18.0877 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
        7.25524 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
        8.44765 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
    GO_annotation: 00185945
      00185946
      00185947
      00185948
    Ortholog (34)
    Paralog: WBGene00092142 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00097627 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00114420 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00273592 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00276807 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00278157 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00279304 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00279311 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00281717 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable hexosyltransferase activity. Predicted to be involved in endocytosis and protein glycosylation. Predicted to be located in membrane. Is an ortholog of C. elegans sgt-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA28178
    Corresponding_transcript: PPA28178.1
    Other_sequence (193)
  Remark: [190208 pad] The CGC name Ppa-sqv-2 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Ppa-sqv-2 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    Removed duplicate Other_name Ppa-sgt-1 Curator_confirmed: WBPerson1983
  Method: Gene