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WormBase Tree Display for Gene: WBGene00117765

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Name Class

WBGene00117765SMapS_parentSequencePPA_ChrII
IdentityVersion2
NameCGC_namePpa-myo-1From_analysisInferred_from_orthology
Sequence_namePPA28211
Molecular_namePPA28211
PPA28211.1
PP69867
Other_nameGENEPREDICTION_SNAP300000086628
Ppa-let-75From_analysisInferred_from_orthology
UMA-S10-76.29Person_evidenceWBPerson606
Public_namePpa-myo-1
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:07WBPerson4055EventImportedfrom NGASP
220 Oct 2010 11:10:51WBPerson2970Name_changeCGC_namePpa-myo-1
Other_namePpa-let-75
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmyo
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010.230798From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
0.692395From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
0From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
GO_annotation00185958
00185959
00185960
00185961
Ortholog (42)
Paralog (20)
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity; actin filament binding activity; and cytoskeletal motor activity. Predicted to be part of myosin complex. Is an ortholog of C. elegans myo-1. In C. elegans, myo-1 is involved in muscle contraction and pharyngeal pumping.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA28211
Corresponding_transcriptPPA28211.1
Other_sequence (56)
Experimental_infoMicroarray_resultsGPL14372_Probes_58917
Expression_clusterWBPaper00064862:Ppa-sul-2(tu1069)_4M1_Down
WBPaper00064862:Ppa-sul-2(tu1069)_4M3_Down
WBPaper00064862:Ppa-sul-2(tu1069)_J4.12_Down
MethodGene