WormBase Tree Display for Gene: WBGene00117998
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WBGene00117998 | SMap | S_parent | Sequence | PPA_ChrIV | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 6 | |||||||
Name | CGC_name | Ppa-ent-6.2 | From_analysis | Inferred_from_orthology | |||||
Sequence_name | PPA28444 | ||||||||
Molecular_name | PPA28444 | ||||||||
PPA28444.1 | |||||||||
PP66585 | |||||||||
Other_name | GENEPREDICTION_SNAP300000085234 | ||||||||
UMM-S2840-69.8 | Person_evidence | WBPerson606 | |||||||
Public_name | Ppa-ent-6.2 | ||||||||
Species | Pristionchus pacificus | ||||||||
History | Version_change | 1 | 06 Aug 2008 09:05:07 | WBPerson4055 | Event | Imported | from NGASP | ||
2 | 20 Mar 2018 10:26:12 | WBPerson4025 | Name_change | CGC_name | Ppa-ent-6.2 | ||||
3 | 08 Feb 2019 15:42:28 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
4 | 08 May 2019 10:09:28 | WBPerson1983 | Name_change | CGC_name | Ppa-ent-6.2 | ||||
5 | 28 May 2021 19:05:20 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
6 | 28 Jul 2021 11:12:29 | WBPerson1983 | Name_change | CGC_name | Ppa-ent-6.2 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | ent | ||||||||
RNASeq_FPKM | WBls:0000032 | 1.28092 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
WBls:0000101 | 0.426973 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
GO_annotation | 00186075 | ||||||||
00186076 | |||||||||
00186077 | |||||||||
Ortholog (25) | |||||||||
Paralog | WBGene00111315 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
WBGene00111570 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00274745 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00274798 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to enable nucleoside transmembrane transporter activity. Predicted to be involved in nucleoside transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans ent-6. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | PPA28444 | |||||||
Corresponding_transcript | PPA28444.1 | ||||||||
Experimental_info | Microarray_results | GPL14372_Probes_30420 | |||||||
GPL14372_Probes_30421 | |||||||||
GPL14372_Probes_30422 | |||||||||
GPL14372_Probes_30423 | |||||||||
GPL14372_Probes_86882 | |||||||||
Remark | [190208 pad] The CGC name Ppa-ent-6.2 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
[210528 pad] The CGC name Ppa-ent-6.2 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
Method | Gene |