WormBase Tree Display for Gene: WBGene00118086
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| WBGene00118086 | SMap | S_parent | Sequence | PPA_ChrIII | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | Ppa-cyy-1 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA28532 | ||||||||
| Molecular_name | PPA28532 | ||||||||
| PPA28532.1 | |||||||||
| PP56122 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000085324 | ||||||||
| UMM-S112-2.31 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-cyy-1 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:07 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 04 Jun 2010 16:10:55 | WBPerson2970 | Name_change | CGC_name | Ppa-cyy-1 | ||||
| 3 | 24 Nov 2017 09:46:52 | WBPerson4055 | Event | Acquires_merge | WBGene00203974 | ||||
| Acquires_merge | WBGene00203974 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cyy | ||||||||
| RNASeq_FPKM | WBls:0000032 | 6.13465 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 3.65491 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 4.83009 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| Ortholog (29) | |||||||||
| Structured_description | Automated_description | Is predicted to encode a protein with the following domains: Galactose-binding-like domain superfamily; PITH domain; Cyclin-like superfamily; Cyclin, N-terminal; PITH domain superfamily; Cyclin, N-terminal domain; and Cyclin-like. Is an ortholog of C. elegans cyy-1. In C. elegans, cyy-1 is involved in negative regulation of synapse assembly; regulation of neuron remodeling; and regulation of terminal button organization. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA28532 | |||||||
| Corresponding_transcript | PPA28532.1 | ||||||||
| Other_sequence (31) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_66007 | |||||||
| GPL14372_Probes_66008 | |||||||||
| GPL14372_Probes_66009 | |||||||||
| GPL14372_Probes_66010 | |||||||||
| Expression_cluster | WBPaper00041207:PP_dauer_up | ||||||||
| Method | Gene |
