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WormBase Tree Display for Gene: WBGene00118183

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Name Class

WBGene00118183SMapS_parentSequencePPA_ChrI
IdentityVersion4
NameCGC_namePpa-aman-3Inferred_automaticallyfrom gene merge
Sequence_namePPA28629
Molecular_namePPA28629
PPA28629.1
PP57033
Other_nameGENEPREDICTION_SNAP300000085415
UMM-S57-0.4Person_evidenceWBPerson606
Public_namePpa-aman-3
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:07WBPerson4055EventImportedfrom NGASP
218 Nov 2010 13:24:32WBPerson2970Name_changeCGC_nameremoved
317 Nov 2017 15:19:43WBPerson4055Name_changeCGC_namePpa-aman-3
424 Nov 2017 09:46:52WBPerson4055EventAcquires_mergeWBGene00205954
Acquires_mergeWBGene00205954
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classaman
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
RNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00186171
00186172
00186173
00186174
00186175
Ortholog (31)
ParalogWBGene00272685Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00273430Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00280086Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable alpha-mannosidase activity and carbohydrate binding activity. Predicted to be involved in mannose metabolic process. Is an ortholog of C. elegans aman-3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA28629
Corresponding_transcriptPPA28629.1
Other_sequenceASC05302_1
ACC13521_1
CJC00515_1
Acan_isotig18703
FC547567.1
Acan_isotig20747
JI165064.1
AS08707
Experimental_infoMicroarray_resultsGPL14372_Probes_78422
GPL14372_Probes_78423
GPL14372_Probes_78424
Expression_clusterWBPaper00041472:Phosphorylated_protein
RemarkPPA28629 replaces Ppa-aman-3 as Public_nameCurator_confirmedWBPerson2970
MethodGene