WormBase Tree Display for Gene: WBGene00118361
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| WBGene00118361 | SMap | S_parent | Sequence | PPA_ChrI | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 6 | |||||||
| Name | CGC_name | Ppa-lec-12 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA28807 | ||||||||
| Molecular_name | PPA28807 | ||||||||
| PPA28807.1 | |||||||||
| PP73993 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000085599 | ||||||||
| UMM-S259-14.66 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-lec-12 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:07 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 08 May 2019 10:09:26 | WBPerson1983 | Name_change | CGC_name | Ppa-lec-12 | ||||
| 3 | 04 Feb 2020 15:43:57 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 4 | 04 Jun 2020 14:38:21 | WBPerson1983 | Name_change | CGC_name | Ppa-lec-12 | ||||
| 5 | 28 May 2021 19:05:20 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 6 | 28 Jul 2021 11:12:29 | WBPerson1983 | Name_change | CGC_name | Ppa-lec-12 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | lec | ||||||||
| RNASeq_FPKM | WBls:0000032 | 26.4505 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 14.0248 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 15.6239 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| GO_annotation | 00186292 | ||||||||
| Ortholog (32) | |||||||||
| Paralog (12) | |||||||||
| Structured_description | Automated_description | Predicted to enable carbohydrate binding activity. Is an ortholog of C. elegans lec-12. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA28807 | |||||||
| Corresponding_transcript | PPA28807.1 | ||||||||
| Other_sequence | HCC08677_1 | ||||||||
| HS00566 | |||||||||
| GPC00116_1 | |||||||||
| GP00509 | |||||||||
| HSC00083_1 | |||||||||
| BXC04999_1 | |||||||||
| GPC01818_1 | |||||||||
| GP02465 | |||||||||
| PPC05177_1 | |||||||||
| HC08014 | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_63187 | |||||||
| GPL14372_Probes_63188 | |||||||||
| GPL14372_Probes_63189 | |||||||||
| Remark | [200204 pad] The CGC name Ppa-lec-12 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [210528 pad] The CGC name Ppa-lec-12 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
