WormBase Tree Display for Gene: WBGene00121308

WBGene00121308 SMap: S_parent: Sequence: Cjap.Contig18098
  Identity: Version: 2
    Name: CGC_name: Cjp-rrf-3 From_analysis: Inferred_from_orthology
      Sequence_name: CJA02104
      Molecular_name: CJA02104
        CJA02104.1
        JA02852
      Public_name: Cjp-rrf-3
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:20 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-rrf-3
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rrf
    RNASeq_FPKM: WBls:0000004 4.56482 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 5.08585 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 3.19189 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        3.78678 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        4.38167 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 11.1296 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        11.6457 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        11.8783 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        12.1108 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        12.1389 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        13.5244 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        13.7115 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        8.03699 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        8.38041 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        9.48784 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
      WBls:0000101 8.17391 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
        8.38041 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
    GO_annotation: 00188330
    Ortholog (31)
    Paralog: WBGene00120394 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00138302 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00213870 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable RNA-dependent RNA polymerase activity. Is an ortholog of C. elegans rrf-3. In C. elegans, rrf-3 is involved in regulatory ncRNA-mediated heterochromatin formation and spermatogenesis. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA02104
    Corresponding_transcript: CJA02104.1
    Other_sequence: Acan_isotig16813
      CBC02376_1
      AE03845
      JI164335.1
      AYC02866_1
      JI461932.1
      JI471910.1
      HQ611979.1
  Experimental_info: Expr_pattern: Expr1076262
    Microarray_results: GPL14145_CJA02104_4539-4598_0.841_50_C
      GPL14145_CJA02104_5802-5861_0.918_5_B
      GPL14145_CJA02104_5939-5998_0.960_1_A
  Method: Gene