Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00121931

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00121931SMapS_parentSequenceCjap.Contig17968
IdentityVersion4
NameCGC_nameCjp-nhr-21From_analysisInferred_from_orthology
Sequence_nameCJA02727
Molecular_nameCJA02727a
CJA02727a.1
JA53718
CJA02727b
JA43273
CJA02727b.1
Public_nameCjp-nhr-21
SpeciesCaenorhabditis japonica
HistoryVersion_change129 Aug 2008 14:34:20WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCjp-nhr-21
229 Jul 2011 11:13:37WBPerson4055EventImportedAugustus import
308 Feb 2019 15:42:28WBPerson1983Name_changeCGC_nameRemoved
428 Jul 2021 11:12:28WBPerson1983Name_changeCGC_nameCjp-nhr-21
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
RNASeq_FPKMWBls:00000045.82884From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000279.21974From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000382.41768From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
2.68297From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
2.94825From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
WBls:00000411.63347From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
1.91351From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
2.25661From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
2.31036From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
2.31808From_analysisRNASeq.japonica.WBls:0000041.control_median
2.32581From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
2.38728From_analysisRNASeq.japonica.WBls:0000041.control_mean
2.72809From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
2.92181From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
3.00861From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
WBls:00001012.41768From_analysisRNASeq.japonica.total_over_all_stages.control_median
3.03944From_analysisRNASeq.japonica.total_over_all_stages.control_mean
GO_annotation00188792
00188793
00188794
00188795
Ortholog (32)
Paralog (107)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans Y47D7A.3 and nhr-21.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA02727a
CJA02727b
Corresponding_transcriptCJA02727a.1
CJA02727b.1
Other_sequenceCBC06536_1
MH09316
Tcol_isotig24551
MHC06272_1
Experimental_infoExpr_patternExpr1073661
Microarray_resultsGPL14145_CJA02727_1270-1329_0.751_129_A
Remark[190208 pad] The CGC name Cjp-nhr-21 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene