WormBase Tree Display for Gene: WBGene00122520

WBGene00122520 SMap: S_parent: Sequence: Cjap.Contig18257
  Identity: Version: 3
    Name: CGC_name: Cjp-pbrm-1 From_analysis: Inferred_from_orthology
      Sequence_name: CJA03316
      Molecular_name: CJA03316a
        CJA03316a.1
        JA62736
        CJA03316b
        JA51733
        CJA03316b.1
      Public_name: Cjp-pbrm-1
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:20 WBPerson4055 Event: Imported: NGASP import
        2 27 Jan 2009 12:59:23 WBPerson4055 Name_change: CGC_name: Cjp-pbrm-1
        3 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pbrm
    RNASeq_FPKM: WBls:0000004 91.4052 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 31.3388 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 17.2962 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        17.3852 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        17.4742 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 10.0398 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        26.3438 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        26.673 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        42.6478 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        44.7851 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        47.2452 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        50.0299 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        5.43344 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        6.32892 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        6.87383 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
      WBls:0000101 17.4742 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        28.5306 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00189261
      00189262
      00189263
    Ortholog (36)
    Paralog: WBGene00177085 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00206587 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable chromatin binding activity. Predicted to be involved in chromatin remodeling. Predicted to be part of RSC-type complex. Is an ortholog of C. elegans pbrm-1. In C. elegans, pbrm-1 is involved in gonad development. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA03316a
      CJA03316b
    Corresponding_transcript: CJA03316a.1
      CJA03316b.1
    Other_sequence (11)
  Method: Gene