WormBase Tree Display for Gene: WBGene00123798

WBGene00123798 SMap: S_parent: Sequence: Cjap.Contig18079
  Identity: Version: 2
    Name: CGC_name: Cjp-lgc-46 From_analysis: Inferred_from_orthology
      Sequence_name: CJA04594
      Molecular_name: CJA04594
        CJA04594.1
        JA59551
      Public_name: Cjp-lgc-46
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:20 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-lgc-46
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lgc
    RNASeq_FPKM: WBls:0000004 13.5218 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 8.91827 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 5.26604 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        5.43266 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        5.59929 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 12.8129 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        14.5521 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        17.0564 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        18.4772 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        2.12965 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        2.65643 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        2.74874 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        2.8378 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        7.82535 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        9.1589 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
      WBls:0000101 5.59929 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        8.1982 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00190346
      00190347
      00190348
      00190349
      00190350
      00190351
    Ortholog (40)
    Paralog (118)
    Structured_description: Automated_description: Predicted to enable extracellular ligand-gated monoatomic ion channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans lgc-46. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA04594
    Corresponding_transcript: CJA04594.1
    Other_sequence (33)
  Experimental_info: Expr_pattern: Expr1084132
      Expr1088644
    Microarray_results: GPL14145_CJA04594_358-417_0.948_1_C
      GPL14145_CJA04594_470-529_0.917_13_A
      GPL14145_CJA04594_630-689_0.676_70_B
      GPL14145_CJA22762_247-306_0.940_1_A
  Method: Gene