WormBase Tree Display for Gene: WBGene00124043

WBGene00124043 SMap: S_parent: Sequence: Cjap.Contig4772
  Identity: Version: 2
    Name: CGC_name: Cjp-tni-4 From_analysis: Inferred_from_orthology
      Sequence_name: CJA04839
      Molecular_name: CJA04839
        CJA04839.1
        JA05580
      Public_name: Cjp-tni-4
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:21 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-tni-4
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tni
    RNASeq_FPKM: WBls:0000004 129.495 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 146.364 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 89.073 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
        94.2105 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        99.348 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
      WBls:0000041 36.0349 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        37.2331 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        39.4818 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        40.1243 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        41.5098 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        42.5637 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        42.8954 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        46.3914 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        47.0949 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        51.2539 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
      WBls:0000101 46.3914 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        61.9069 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00190565
    Ortholog (38)
    Paralog: WBGene00119505 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00120959 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00127002 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
    Structured_description: Automated_description: Predicted to be part of troponin complex. Is an ortholog of C. elegans tni-4. In C. elegans, tni-4 is involved in embryo development and pharyngeal pumping. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA04839
    Corresponding_transcript: CJA04839.1
    Other_sequence (46)
  Experimental_info: Expr_pattern: Expr1080349
    Microarray_results: GPL14145_CJA04839_143-202_0.846_20_B
      GPL14145_CJA04839_323-382_0.844_22_A
      GPL14145_CJA04839_446-505_0.947_1_C
  Method: Gene