WormBase Tree Display for Gene: WBGene00126549

WBGene00126549 SMap: S_parent: Sequence: Cjap.Contig17597
  Identity: Version: 2
    Name: CGC_name: Cjp-col-172 From_analysis: Inferred_from_orthology
      Sequence_name: CJA07345
      Molecular_name: CJA07345
        CJA07345.1
        JA11981
      Public_name: Cjp-col-172
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:21 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-col-172
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: col
    RNASeq_FPKM: WBls:0000004 17.4873 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 1.91052 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 5.0909 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        6.82331 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        8.55572 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 0.130559 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        0.155248 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        0.32261 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        0.350855 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        0.351692 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        0.352529 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        0.404742 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        0.40708 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        0.779868 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        0 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
      WBls:0000101 0.404742 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        2.74041 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00192513
    Ortholog (31)
    Paralog (183)
    Structured_description: Automated_description: Predicted to be a structural constituent of cuticle. Is an ortholog of C. elegans col-172. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA07345
    Corresponding_transcript: CJA07345.1
    Other_sequence (46)
  Experimental_info: Expr_pattern: Expr1081182
    Microarray_results: GPL14145_CJA07345_687-746_0.947_5_C
      GPL14145_CJA07345_950-1009_0.964_2_A
      GPL14145_CJA07345_953-1012_0.971_1_B
  Method: Gene