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WormBase Tree Display for Gene: WBGene00126983

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Name Class

WBGene00126983SMapS_parentSequenceCjap.Contig18187
IdentityVersion3
NameCGC_nameCjp-nsph-1.1From_analysisInferred_from_orthology
Sequence_nameCJA07779
Molecular_nameCJA07779
CJA07779.1
JA17607
Public_nameCjp-nsph-1.1
SpeciesCaenorhabditis japonica
HistoryVersion_change129 Aug 2008 14:34:21WBPerson4055EventImportedNGASP import
229 Jul 2011 11:13:37WBPerson4055EventImportedAugustus import
328 Jul 2021 11:12:26WBPerson1983Name_changeCGC_nameCjp-nsph-1.1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnsph
RNASeq_FPKMWBls:00000040.35821From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000270From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000380.260625From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
0.52125From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
0From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
WBls:00000410.334639From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
0.382202From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
0.631654From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
0.815156From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
13.7572From_analysisRNASeq.japonica.WBls:0000041.control_median
23.4993From_analysisRNASeq.japonica.WBls:0000041.control_mean
26.6993From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
50.7349From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
53.3346From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
55.0618From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
WBls:00001010.52125From_analysisRNASeq.japonica.total_over_all_stages.control_median
14.5288From_analysisRNASeq.japonica.total_over_all_stages.control_mean
Ortholog (25)
ParalogWBGene00119503Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00128205Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00130427Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00132054Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00217574Caenorhabditis japonicaFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domain: Cytosolic motility protein. Is an ortholog of C. elegans nsph-1.1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA07779
Corresponding_transcriptCJA07779.1
Other_sequenceACC37632_1
EX540517.1
ACC25014_1
AS09626
Acan_isotig16693
JI171037.1
ASC05764_1
JO472314.1
EX540039.1
JI211414.1
Experimental_infoExpr_patternExpr1085107
Microarray_resultsGPL14145_CJA07779_510-569_0.744_94_C
GPL14145_CJA07779_656-715_0.935_4_B
GPL14145_CJA07779_957-1016_0.965_1_A
MethodGene