WormBase Tree Display for Gene: WBGene00127013

WBGene00127013 SMap: S_parent: Sequence: Cjap.Contig17713
  Identity: Version: 2
    Name: CGC_name: Cjp-cdc-42 From_analysis: Inferred_from_orthology
      Sequence_name: CJA07809
      Molecular_name: CJA07809
        CJA07809.1
        JA06605
      Public_name: Cjp-cdc-42
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:21 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-cdc-42
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cdc
    RNASeq_FPKM: WBls:0000004 270.733 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 137.501 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 108.342 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        119.7 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        131.057 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 118.126 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        122.172 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        123.644 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        125.116 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        169.346 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        255.172 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        293.35 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        295.037 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        51.1643 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        94.6342 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
      WBls:0000101 125.116 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        154.031 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00192842
      00192843
    Ortholog (30)
    Paralog: WBGene00119449 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00122168 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00132141 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00133086 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00131764 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00122287 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00128154 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00129988 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00133128 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00134945 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable GTP binding activity and GTPase activity. Is an ortholog of C. elegans cdc-42. In C. elegans, cdc-42 is involved in several processes, including establishment of mitotic spindle orientation; positive regulation of nematode male tail tip morphogenesis; and regulation of cellular component organization. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA07809
    Corresponding_transcript: CJA07809.1
    Other_sequence (112)
  Experimental_info: Expr_pattern: Expr1072057
    Microarray_results: GPL14145_CJA07809_359-418_0.959_2_B
      GPL14145_CJA07809_45-104_0.905_11_C
      GPL14145_CJA07809_518-577_0.961_1_A
  Method: Gene