WormBase Tree Display for Gene: WBGene00127127

WBGene00127127 SMap: S_parent: Sequence: Cjap.Contig17659
  Identity: Version: 7
    Name: CGC_name: Cjp-hda-10 From_analysis: Inferred_from_orthology
      Sequence_name: CJA07923
      Molecular_name: CJA07923a
        CJA07923a.1
        JA10886
        CJA07923b
        JA56079
        CJA07923b.1
      Other_name: Cjp-hda-6 From_analysis: Inferred_from_orthology
      Public_name: Cjp-hda-10
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:21 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-hda-6
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
        3 12 Apr 2012 16:41:36 WBPerson2970 Name_change: CGC_name: Cjp-hda-10
                Other_name: Cjp-hda-6
        4 08 Feb 2019 15:42:28 WBPerson1983 Name_change: CGC_name: Removed
        5 08 May 2019 10:09:26 WBPerson1983 Name_change: CGC_name: Cjp-hda-10
        6 28 May 2021 19:05:20 WBPerson1983 Name_change: CGC_name: Removed
        7 28 Jul 2021 11:12:29 WBPerson1983 Name_change: CGC_name: Cjp-hda-10
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: hda
    RNASeq_FPKM: WBls:0000004 30.0198 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 15.4667 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 12.982 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
        14.2256 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        15.4693 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
      WBls:0000041 23.823 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        23.8736 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        25.9342 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        26.3005 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        29.3064 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        32.3123 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        35.0705 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        45.7316 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        50.7939 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        51.7952 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
      WBls:0000101 25.9342 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        27.2694 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    Ortholog (32)
    Paralog (12)
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Histone deacetylase family; Histone deacetylase domain; Histone deacetylase domain superfamily; and Ureohydrolase domain superfamily. Is an ortholog of C. elegans hda-10. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA07923a
      CJA07923b
    Corresponding_transcript: CJA07923a.1
      CJA07923b.1
    Other_sequence (19)
  Experimental_info: Expr_pattern: Expr1081682
    Microarray_results: GPL14145_CJA07923_1211-1270_0.947_1_C
      GPL14145_CJA07923_553-612_0.781_77_A
      GPL14145_CJA07923_675-734_0.868_33_B
  Remark: [190208 pad] The CGC name Cjp-hda-10 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Cjp-hda-10 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene