Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00127354

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00127354SMapS_parentSequenceCjap.Contig17495
IdentityVersion2
NameCGC_nameCjp-vps-45From_analysisInferred_from_orthology
Sequence_nameCJA08150
Molecular_nameCJA08150
CJA08150.1
JA57667
Public_nameCjp-vps-45
SpeciesCaenorhabditis japonica
HistoryVersion_change129 Aug 2008 14:34:21WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCjp-vps-45
229 Jul 2011 11:13:37WBPerson4055EventImportedAugustus import
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classvps
RNASeq_FPKMWBls:000000430.2198From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:000002720.1037From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:000003810.752From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
10.7928From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
10.8336From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:000004110.579From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
10.9517From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
12.4596From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
13.395From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
15.9123From_analysisRNASeq.japonica.WBls:0000041.control_median
16.2584From_analysisRNASeq.japonica.WBls:0000041.control_mean
18.4296From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
20.5084From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
21.4911From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
22.2532From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
WBls:000010113.395From_analysisRNASeq.japonica.total_over_all_stages.control_median
15.5367From_analysisRNASeq.japonica.total_over_all_stages.control_mean
GO_annotation00193122
Ortholog (31)
ParalogWBGene00127953Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00135188Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00135975Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00210715Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00214490Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00214682Caenorhabditis japonicaFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in vesicle-mediated transport. Is an ortholog of C. elegans vps-45. In C. elegans, vps-45 is involved in pinocytosis and receptor-mediated endocytosis.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA08150
Corresponding_transcriptCJA08150.1
Other_sequence (49)
Experimental_infoExpr_patternExpr1087820
Microarray_resultsGPL14145_CJA08150_324-383_0.652_76_C
GPL14145_CJA08150_719-778_0.758_61_B
GPL14145_CJA08150_812-871_0.951_2_A
MethodGene