WormBase Tree Display for Gene: WBGene00129079

WBGene00129079 SMap: S_parent: Sequence: Cjap.Contig17804
  Identity: Version: 5
    Name: CGC_name: Cjp-cng-3.2 From_analysis: Inferred_from_orthology
      Sequence_name: CJA09875
      Molecular_name: CJA09875a
        CJA09875a.1
        JA61630
        CJA09875b
        JA63642
        CJA09875b.1
      Other_name: Cjp-cng-3 From_analysis: Inferred_from_orthology
      Public_name: Cjp-cng-3.2
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:21 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-cng-3
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
        3 04 Feb 2020 15:43:57 WBPerson1983 Name_change: CGC_name: Cjp-cng-3.2
                Other_name: Cjp-cng-3
        4 28 May 2021 19:05:19 WBPerson1983 Name_change: CGC_name: Cjp-cng-3
                Other_name: Cjp-cng-3.2
        5 28 Jul 2021 11:12:29 WBPerson1983 Name_change: CGC_name: Cjp-cng-3.2
                Other_name: Cjp-cng-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cng
    RNASeq_FPKM: WBls:0000004 0.549889 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 0.268944 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 0.086604 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        0.173209 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        0 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 0.045522 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        0.079139 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        0.095423 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        0.095524 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        0.111909 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        0.145589 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        0.187399 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        0.193825 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        0 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
            RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
      WBls:0000101 0.111909 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        0.135033 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    Ortholog (17)
    Paralog: WBGene00128739 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00131004 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00120729 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00135117 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00136729 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00209834 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00216335 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00216704 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00217643 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Cyclic nucleotide-binding domain; Cyclic nucleotide-binding-like; and RmlC-like jelly roll fold. Is an ortholog of C. elegans cng-3. In C. elegans, cng-3 is involved in multicellular organismal reproductive process; positive regulation of growth rate; and response to heat. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA09875a
      CJA09875b
    Corresponding_transcript: CJA09875a.1
      CJA09875b.1
    Other_sequence: BXC01404_1
      JI171402.1
      Oden_isotig22868
      JI168297.1
      Dviv_isotig15882
  Experimental_info: Expr_pattern: Expr1078392
    Microarray_results: GPL14145_CJA09875_1031-1090_0.780_107_B
      GPL14145_CJA09875_1197-1256_0.931_1_A
      GPL14145_CJA09875_1348-1407_0.788_96_C
  Method: Gene