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WormBase Tree Display for Gene: WBGene00129084

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Name Class

WBGene00129084SMapS_parentSequenceCjap.Contig11814
IdentityVersion3
NameCGC_nameCjp-tbx-35.3From_analysisInferred_from_orthology
Sequence_nameCJA09880
Molecular_nameCJA09880
CJA09880.1
JA65632
Public_nameCjp-tbx-35.3
SpeciesCaenorhabditis japonica
HistoryVersion_change129 Aug 2008 14:34:21WBPerson4055EventImportedNGASP import
229 Jul 2011 11:13:37WBPerson4055EventImportedAugustus import
320 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCjp-tbx-35.3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtbx
RNASeq_FPKMWBls:00000041.64106From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000270.396698From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000380.125876From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
0.251751From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
0From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:00000410.043262From_analysisRNASeq.japonica.WBls:0000041.control_median
0.086523From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
0.142341From_analysisRNASeq.japonica.WBls:0000041.control_mean
0.244698From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
0.295935From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
0.511571From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
0From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
WBls:00001010.086523From_analysisRNASeq.japonica.total_over_all_stages.control_median
0.26371From_analysisRNASeq.japonica.total_over_all_stages.control_mean
GO_annotation00194535
00194536
00194537
00194538
Ortholog (22)
ParalogWBGene00208296Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00212804Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00209841Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Is an ortholog of C. elegans tbx-35. In C. elegans, tbx-35 is involved in cell fate specification; pharyngeal muscle development; and positive regulation of transcription by RNA polymerase II.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA09880
Corresponding_transcriptCJA09880.1
Experimental_infoExpr_patternExpr1079540
Microarray_resultsGPL14145_CJA09880_520-579_0.793_55_C
MethodGene