WormBase Tree Display for Gene: WBGene00129326

WBGene00129326 SMap: S_parent: Sequence: Cjap.Contig18087
  Identity: Version: 2
    Name: CGC_name: Cjp-vps-18 From_analysis: Inferred_from_orthology
      Sequence_name: CJA10122
      Molecular_name: CJA10122
        CJA10122.1
        JA67250
      Public_name: Cjp-vps-18
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:21 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-vps-18
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: vps
    RNASeq_FPKM: WBls:0000004 16.5182 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 14.1346 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 10.1083 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        11.0892 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        12.07 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 11.6511 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        14.5426 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        16.3475 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        24.3395 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        24.9256 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        25.0852 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        5.31065 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        6.51982 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        6.85786 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        6.9548 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
      WBls:0000101 12.07 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        13.0132 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00194725
      00194726
    Ortholog (35)
    Paralog: WBGene00131350 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be involved in intracellular protein transport and vesicle-mediated transport. Is an ortholog of C. elegans vps-18. In C. elegans, vps-18 is involved in endosome organization and phagosome-lysosome fusion involved in apoptotic cell clearance. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA10122
    Corresponding_transcript: CJA10122.1
    Other_sequence (29)
  Experimental_info: Expr_pattern: Expr1088575
    Microarray_results: GPL14145_CJA10122_1213-1272_0.818_98_C
      GPL14145_CJA10122_1301-1360_0.736_237_A
      GPL14145_CJA10122_255-314_0.757_207_B
  Method: Gene