WormBase Tree Display for Gene: WBGene00129818

WBGene00129818 SMap: S_parent: Sequence: Cjap.Contig12002
  Identity: Version: 5
    Name: CGC_name: Cjp-cln-3.3.1 From_analysis: Inferred_from_orthology
      Sequence_name: CJA10614
      Molecular_name: CJA10614
        CJA10614.1
        JA49286
      Public_name: Cjp-cln-3.3.1
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:22 WBPerson4055 Event: Imported: NGASP import
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
        3 04 Jun 2020 14:38:22 WBPerson1983 Name_change: CGC_name: Cjp-cln-3.3.1
        4 28 May 2021 19:05:20 WBPerson1983 Name_change: CGC_name: Removed
        5 28 Jul 2021 11:12:29 WBPerson1983 Name_change: CGC_name: Cjp-cln-3.3.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cln
    RNASeq_FPKM: WBls:0000004 0.543453 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 1.19747 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 1.4251 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        1.50138 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        1.57767 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 0.582845 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        0.613224 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        1.22819 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        1.23161 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        1.27638 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        1.31884 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        1.40607 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        1.49114 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        1.79462 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        1.86338 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
      WBls:0000101 1.15037 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
        1.23161 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
    GO_annotation: 00195137
    Ortholog (32)
    Paralog: WBGene00124234 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00126355 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00135704 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00210213 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00177253 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
    Structured_description: Automated_description: Predicted to be located in membrane. Is an ortholog of C. elegans cln-3.3. In C. elegans, cln-3.3 is involved in determination of adult lifespan and regulation of egg-laying behavior. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA10614
    Corresponding_transcript: CJA10614.1
    Other_sequence (28)
  Experimental_info: Expr_pattern: Expr1084488
      Expr1088475
      Expr1091275
    Microarray_results: GPL14145_CJA06936_1543-1602_0.811_93_A
      GPL14145_CJA06936_1572-1631_0.747_165_B
      GPL14145_CJA10614_1453-1512_0.946_1_A
      GPL14145_CJA11553_417-476_0.830_48_A
  Remark: [210528 pad] The CGC name Cjp-cln-3.3.1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene