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WormBase Tree Display for Gene: WBGene00130054

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Name Class

WBGene00130054SMapS_parentSequenceCjap.Contig18184
IdentityVersion2
NameCGC_nameCjp-apt-9From_analysisInferred_from_orthology
Sequence_nameCJA10850
Molecular_nameCJA10850
CJA10850.1
JA47213
Public_nameCjp-apt-9
SpeciesCaenorhabditis japonica
HistoryVersion_change129 Aug 2008 14:34:22WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCjp-apt-9
229 Jul 2011 11:13:37WBPerson4055EventImportedAugustus import
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classapt
RNASeq_FPKMWBls:00000047.54315From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000279.8494From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000381.90367From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
2.44129From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
2.97891From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:00000410.571838From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
0.774555From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
0.886569From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
0.928637From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
0.930752From_analysisRNASeq.japonica.WBls:0000041.control_median
0.932866From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
0.945808From_analysisRNASeq.japonica.WBls:0000041.control_mean
1.02632From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
1.15596From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
1.28972From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
WBls:00001011.02632From_analysisRNASeq.japonica.total_over_all_stages.control_median
2.29551From_analysisRNASeq.japonica.total_over_all_stages.control_mean
GO_annotation00195312
00195313
Ortholog (25)
ParalogWBGene00121857Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00122323Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00129867Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00132831Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00207247Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00218222Caenorhabditis japonicaFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable phosphatidylinositol binding activity and ubiquitin binding activity. Is an ortholog of C. elegans apt-9. In C. elegans, apt-9 is involved in protein secretion.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA10850
Corresponding_transcriptCJA10850.1
Other_sequenceJI169596.1
CRC03186_1
CR04114
Experimental_infoExpr_patternExpr1081534
Microarray_resultsGPL14145_CJA10850_1425-1484_0.918_11_C
GPL14145_CJA10850_1638-1697_0.848_47_B
GPL14145_CJA10850_213-272_0.835_62_A
MethodGene