WormBase Tree Display for Gene: WBGene00131338

WBGene00131338 SMap: S_parent: Sequence: Cjap.Contig17597
  Identity: Version: 3
    Name: CGC_name: Cjp-cdf-1 From_analysis: Inferred_from_orthology
      Sequence_name: CJA12134
      Molecular_name: CJA12134a
        CJA12134a.1
        JA13556
        CJA12134b
        JA68547
        CJA12134b.1
      Public_name: Cjp-cdf-1
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:22 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-cdf-1
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
        3 30 Apr 2015 13:34:49 WBPerson4055 Event: Acquires_merge: WBGene00209577
      Acquires_merge: WBGene00209577
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cdf
    RNASeq_FPKM: WBls:0000004 18.0976 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 13.5223 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 12.9518 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        15.0131 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        17.0743 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 12.5067 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        13.4968 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        13.788 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        18.7729 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        22.2542 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        22.9004 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        25.7356 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        28.5459 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        29.7182 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        40.639 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
      WBls:0000101 17.0743 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        18.8346 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00196311
      00196312
      00196313
      00196314
    Ortholog (35)
    Paralog (12)
    Structured_description: Automated_description: Predicted to enable monoatomic cation transmembrane transporter activity. Predicted to be involved in monoatomic cation transport and transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans cdf-1. In C. elegans, cdf-1 is involved in cellular response to zinc ion; positive regulation of Ras protein signal transduction; and positive regulation of vulval development. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA12134a
      CJA12134b
    Corresponding_transcript: CJA12134a.1
      CJA12134b.1
    Other_sequence: CR11341
      CRC06860_1
      Dviv_isotig17034
      CR00374
      AE01123
      EL889202.1
      AE00457
      AYC00267_1
  Experimental_info: Expr_pattern: Expr1079966
    Microarray_results: GPL14145_CJA12134_1091-1150_0.907_8_B
      GPL14145_CJA12134_1337-1396_0.934_1_C
      GPL14145_CJA12134_1450-1509_0.913_3_A
  Method: Gene