WormBase Tree Display for Gene: WBGene00131850

WBGene00131850 SMap: S_parent: Sequence: Cjap.Contig1284
  Identity: Version: 3
    Name: CGC_name: Cjp-rpoa-12 From_analysis: Inferred_from_orthology
      Sequence_name: CJA12646
      Molecular_name: CJA12646
        CJA12646.1
        JA08188
      Public_name: Cjp-rpoa-12
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:22 WBPerson4055 Event: Imported: NGASP import
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
        3 28 Sep 2012 14:32:03 WBPerson2970 Name_change: CGC_name: Cjp-rpoa-12
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rpoa
    RNASeq_FPKM: WBls:0000004 23.5613 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 8.98186 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 10.7401 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
        7.87332 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        9.30671 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
      WBls:0000041 0.858267 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        10.3463 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        109.78 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        118.053 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        23.4294 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        28.7843 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        29.2936 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        29.803 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        48.8088 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        69.4163 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
      WBls:0000101 23.4294 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        33.9713 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00196692
      00196693
      00196694
      00196695
    Ortholog (29)
    Paralog: WBGene00128156 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00183782 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable DNA-directed 5'-3' RNA polymerase activity; nucleic acid binding activity; and zinc ion binding activity. Predicted to be involved in DNA-templated transcription. Is an ortholog of C. elegans rpoa-12. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA12646
    Corresponding_transcript: CJA12646.1
    Other_sequence (42)
  Experimental_info: Expr_pattern: Expr1078942
    Microarray_results: GPL14145_CJA12646_155-214_0.920_3_A
      GPL14145_CJA12646_290-349_0.963_1_B
      GPL14145_CJA12646_50-109_0.792_18_C
  Method: Gene