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WormBase Tree Display for Gene: WBGene00133438

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Name Class

WBGene00133438SMapS_parentSequenceCjap.Contig17724
IdentityVersion3
NameCGC_nameCjp-mks-5From_analysisInferred_from_orthology
Sequence_nameCJA14234
Molecular_nameCJA14234a
CJA14234a.1
JA63234
CJA14234b
JA61078
CJA14234b.1
Public_nameCjp-mks-5
SpeciesCaenorhabditis japonica
HistoryVersion_change129 Aug 2008 14:34:22WBPerson4055EventImportedNGASP import
203 May 2011 10:05:16WBPerson2970Name_changeCGC_nameCjp-mks-5
329 Jul 2011 11:13:38WBPerson4055EventImportedAugustus import
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmks
RNASeq_FPKMWBls:00000047.54042From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000274.54736From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000380.753821From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
1.05212From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
1.35042From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:00000410.216346From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
0.237327From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
0.343485From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
0.387021From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
0.389464From_analysisRNASeq.japonica.WBls:0000041.control_mean
0.399108From_analysisRNASeq.japonica.WBls:0000041.control_median
0.411195From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
0.477868From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
0.503678From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
0.538795From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
WBls:00001010.477868From_analysisRNASeq.japonica.total_over_all_stages.control_median
1.33136From_analysisRNASeq.japonica.total_over_all_stages.control_mean
OrthologWBGene00007490Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00025969Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00053450Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00103914Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00149641Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00270492Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00228917Brugia malayiFrom_analysisWormBase-Compara
WBGene00206538Caenorhabditis elegansFrom_analysisWormBase-Compara
CBOVI.g6238Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP26.g1676Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g12305Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g9152Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g9155Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g16556Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g16779Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g2984Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g24264Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g27676Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g17308Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-mks-5Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold618.g6091Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold618.g6093Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00036.g1991Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00036.g1992Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_17660Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_005468Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_005470Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g08738Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g8264Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20292600Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_20292700Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00053448Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrII_pilon.g5801Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00248168Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: C2 domain superfamily; RPGRIP1 family; RPGR-interacting protein 1, first C2 domain; and First C2 domain of RPGR-interacting protein 1. Is an ortholog of C. elegans mks-5. In C. elegans, mks-5 is involved in several processes, including non-motile cilium assembly; protein localization to cilium; and protein to membrane docking.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA14234a
CJA14234b
Corresponding_transcriptCJA14234a.1
CJA14234b.1
Other_sequenceJI461601.1
HBC18877_1
XIC02421_1
XI03055
FF679069.1
CR10647
MH05682
CRC07282_1
Experimental_infoExpr_patternExpr1084228
Microarray_resultsGPL14145_CJA14234_3771-3830_0.822_111_B
GPL14145_CJA14234_4235-4294_0.926_6_C
GPL14145_CJA14234_4381-4440_0.941_3_A
MethodGene